AFNI Start to Finish Playlist



Although the title may sound a little risqué, what it actually refers to is a compilation of tutorials - twenty-one in all - that cover the analysis of a single subject from data import to viewing the results and making publication-quality pictures. I closely follow a script already up on the AFNI website written by Rick Reynolds, and I've included links to the relevant step of the script. The idea here was to actually show what each step looks like, and to provide some additional commentary. Half of the commentary is wrong, though; the only problem is, I'm not sure which half.

A link to the script can be found here; a link to the tutorials can be found here. Particularly important is understanding the design matrix, and gaining an intuition for how it is applied at each voxel; I will be going into more detail about that in the future.